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non targeting nt control sgrna  (Addgene inc)


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    Structured Review

    Addgene inc non targeting nt control sgrna
    Non Targeting Nt Control Sgrna, supplied by Addgene inc, used in various techniques. Bioz Stars score: 96/100, based on 6181 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/non+targeting+sgrna/lentiCRISPR+v2+(Plasmid+%2352961)/pm41840739-171-12-20
    Average 96 stars, based on 6181 article reviews
    non targeting nt control sgrna - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    Plasmid Preparation:

    Article Title: Lysine-specific demethylase 1 regulates hematopoietic stem cell expansion and myeloid cell differentiation
    Article Snippet: For CRISPR-Cas9 gene editing, THP1 and K562 cells were initially transduced with pLenti-Cas9-P2A-Puro (Addgene #110837), and cells gaining stable Cas9 expression were selected by culture in 2 μg/ml Puromycine. .. In a second step, LSD1 sgRNAs or a non-targeting sgRNA, expressed by the pLKO5.sgRNA.EFS.GFP vector (Addgene #57822) was introduced into Cas9-expressing cells. ..

    Article Title: CRISPR/Cas9-Mediated Targeting of BPV-1-Transformed Primary Equine Sarcoid Fibroblasts.
    Article Snippet: Clones with the correct insert were amplified and plasmids for lentivirus production were purified using the ZymoPURE II Plasmid Midiprep Kit (Zymo Research, USA). .. Lentivirus production was performed using calcium-phosphate-mediated transfection of HEK-293 T-cells (15 cm dish, Corning, Corning, NY, USA) with the plentiCRISPRv2 vector containing the respective sgRNA or a non-targeting sgRNA and the lentiviral plasmids pCMV-VSVG, pMDLg/pRRE and the REV plasmid (Addgene, Watertown, MA, USA). ..

    Article Title: miR-10b-5p regulates adipocyte lineage commitment and adipogenesis via targeting of Gata6 and Tubby
    Article Snippet: The chosen single-stranded oligonucleotides containing the guide sequence of the gRNA were annealed and cloned into the BbsI linearised px330-U6-Chimeric_BB_CBh-huSpCas9 vector (Addgene plasmid # 42230); ( ). .. The non-targeting sgRNA (Addgene plasmid # 42230) was used as a negative control. ..

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: Human SCLC cell line H1048 was obtained from ATCC and cultured in RPMI media supplemented with 10% fetal bovine serum (FBS), 1% L-glutamine, and 1% penicillin/streptomycin antibiotic cocktail. .. To generate H1048 sg NTC, sg PTEN, and myrAKT cell lines, cells were infected with a non-targeting sgRNA (sg NTC ) or an sgRNA against PTEN (sg PTEN : 5’- GAC TGG GAA TAG TTA CTC CC -3’) in the LCV2-hygro backbone (Addgene Plasmid #98291), or infected with the pHRIG-AKT1 lentiviral construct (Addgene, cat# 53583). .. In brief, high-titer virus (∼1-5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including the targeting construct and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: .. To generate Pten- knockout RPM and RPMA organoids, basal organoids transformed by CMV-Cre were infected with a non-targeting sgRNA (sg Ctrl ) or an sgRNA against Pten (sg Pten : TCA TCA AAG AGA TCG TTA GC) that were cloned into the LCV2-puro backbone (Addgene Plasmid #52961). .. In brief, high-titer virus (∼1–5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including LCV2-sg Ctrl or sg Pten and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).

    Clone Assay:

    Article Title: Biphasic control of the B cell transcriptome by mTORC1 and GSK3
    Article Snippet: .. For this, selected sgRNAs and a non-targeting sgRNA from the Brunello library were cloned into lentiGuide-puro (Addgene). .. Genomic DNA from sorted cells was extracted using DNeasy Blood and Tissue kit (Qiagen) according to the manufacturer’s instructions.

    Article Title: Patient derived model of UBA5- associated encephalopathy identifies defects in neurodevelopment and highlights potential therapies
    Article Snippet: .. Additionally, a non-targeting sgRNA that cannot bind in the human genome was used as a negative control. sgRNAs were cloned into the pAW12.lentiguide.GFP (Addgene, 104374) using oligos (IDT) with appropriate overhangs (Table S3). .. Briefly, the pAW12.lentiguide.GFP backbone was digested with Anza Esp3I (ThermoFisher,), followed by heat inactivation.

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: .. To generate Pten- knockout RPM and RPMA organoids, basal organoids transformed by CMV-Cre were infected with a non-targeting sgRNA (sg Ctrl ) or an sgRNA against Pten (sg Pten : TCA TCA AAG AGA TCG TTA GC) that were cloned into the LCV2-puro backbone (Addgene Plasmid #52961). .. In brief, high-titer virus (∼1–5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including LCV2-sg Ctrl or sg Pten and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).

    other:

    Article Title: Biphasic control of the B cell transcriptome by mTORC1 and GSK3.
    Article Snippet: Shalem, O., Sanjana, N.E., Hartenian, E., Shi, X., Scott, D.A., Mikkelson, T., Heckl, D., Ebert, B.L., Root, D.E., Doench, J.G., and Zhang, F. (2014).

    Transfection:

    Article Title: CRISPR/Cas9-Mediated Targeting of BPV-1-Transformed Primary Equine Sarcoid Fibroblasts.
    Article Snippet: Clones with the correct insert were amplified and plasmids for lentivirus production were purified using the ZymoPURE II Plasmid Midiprep Kit (Zymo Research, USA). .. Lentivirus production was performed using calcium-phosphate-mediated transfection of HEK-293 T-cells (15 cm dish, Corning, Corning, NY, USA) with the plentiCRISPRv2 vector containing the respective sgRNA or a non-targeting sgRNA and the lentiviral plasmids pCMV-VSVG, pMDLg/pRRE and the REV plasmid (Addgene, Watertown, MA, USA). ..

    Negative Control:

    Article Title: miR-10b-5p regulates adipocyte lineage commitment and adipogenesis via targeting of Gata6 and Tubby
    Article Snippet: The chosen single-stranded oligonucleotides containing the guide sequence of the gRNA were annealed and cloned into the BbsI linearised px330-U6-Chimeric_BB_CBh-huSpCas9 vector (Addgene plasmid # 42230); ( ). .. The non-targeting sgRNA (Addgene plasmid # 42230) was used as a negative control. ..

    Article Title: Patient derived model of UBA5- associated encephalopathy identifies defects in neurodevelopment and highlights potential therapies
    Article Snippet: .. Additionally, a non-targeting sgRNA that cannot bind in the human genome was used as a negative control. sgRNAs were cloned into the pAW12.lentiguide.GFP (Addgene, 104374) using oligos (IDT) with appropriate overhangs (Table S3). .. Briefly, the pAW12.lentiguide.GFP backbone was digested with Anza Esp3I (ThermoFisher,), followed by heat inactivation.

    Infection:

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: Human SCLC cell line H1048 was obtained from ATCC and cultured in RPMI media supplemented with 10% fetal bovine serum (FBS), 1% L-glutamine, and 1% penicillin/streptomycin antibiotic cocktail. .. To generate H1048 sg NTC, sg PTEN, and myrAKT cell lines, cells were infected with a non-targeting sgRNA (sg NTC ) or an sgRNA against PTEN (sg PTEN : 5’- GAC TGG GAA TAG TTA CTC CC -3’) in the LCV2-hygro backbone (Addgene Plasmid #98291), or infected with the pHRIG-AKT1 lentiviral construct (Addgene, cat# 53583). .. In brief, high-titer virus (∼1-5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including the targeting construct and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: .. To generate Pten- knockout RPM and RPMA organoids, basal organoids transformed by CMV-Cre were infected with a non-targeting sgRNA (sg Ctrl ) or an sgRNA against Pten (sg Pten : TCA TCA AAG AGA TCG TTA GC) that were cloned into the LCV2-puro backbone (Addgene Plasmid #52961). .. In brief, high-titer virus (∼1–5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including LCV2-sg Ctrl or sg Pten and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).

    Construct:

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: Human SCLC cell line H1048 was obtained from ATCC and cultured in RPMI media supplemented with 10% fetal bovine serum (FBS), 1% L-glutamine, and 1% penicillin/streptomycin antibiotic cocktail. .. To generate H1048 sg NTC, sg PTEN, and myrAKT cell lines, cells were infected with a non-targeting sgRNA (sg NTC ) or an sgRNA against PTEN (sg PTEN : 5’- GAC TGG GAA TAG TTA CTC CC -3’) in the LCV2-hygro backbone (Addgene Plasmid #98291), or infected with the pHRIG-AKT1 lentiviral construct (Addgene, cat# 53583). .. In brief, high-titer virus (∼1-5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including the targeting construct and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).

    Knock-Out:

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: .. To generate Pten- knockout RPM and RPMA organoids, basal organoids transformed by CMV-Cre were infected with a non-targeting sgRNA (sg Ctrl ) or an sgRNA against Pten (sg Pten : TCA TCA AAG AGA TCG TTA GC) that were cloned into the LCV2-puro backbone (Addgene Plasmid #52961). .. In brief, high-titer virus (∼1–5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including LCV2-sg Ctrl or sg Pten and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).

    Transformation Assay:

    Article Title: Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer
    Article Snippet: .. To generate Pten- knockout RPM and RPMA organoids, basal organoids transformed by CMV-Cre were infected with a non-targeting sgRNA (sg Ctrl ) or an sgRNA against Pten (sg Pten : TCA TCA AAG AGA TCG TTA GC) that were cloned into the LCV2-puro backbone (Addgene Plasmid #52961). .. In brief, high-titer virus (∼1–5 ×10 7 pfu) was produced using HEK-293T cells transfected with a three-plasmid system including LCV2-sg Ctrl or sg Pten and lentiviral packaging plasmids pCMV delta R8.2 (Addgene Plasmid #8455) and pCMV-VSVG (Addgene Plasmid #8454).



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    (A) Schematic workflow of the CRISPR screen approach. OCAB reporter cells are created through mOrange-P2A knock-in, transduced with the genome-wide <t>sgRNA</t> library Brunello, and FACS-sorted to identify the activators and repressors of OCAB expression. (B) Distribution of OCAB activators ranked by the RRA score. Selected activators were individually validated with specific targeting sgRNAs. A total of 113 hits were tested with 74 true positives. (C) mO-OCAB expression measured by flow cytometry 10 days after FLI1 or control sgRNA transduction. (D) ChIP-seq (FLI1, BRD4) and RNA-seq profiles at the OCAB locus in control and FLI1-depleted cells. Fold change and adjusted p values (Benjamini-Hochberg) are indicated. (E) As in (C) but after SPEN or control sgRNA transduction.
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    Image Search Results


    (A) Schematic workflow of the CRISPR screen approach. OCAB reporter cells are created through mOrange-P2A knock-in, transduced with the genome-wide sgRNA library Brunello, and FACS-sorted to identify the activators and repressors of OCAB expression. (B) Distribution of OCAB activators ranked by the RRA score. Selected activators were individually validated with specific targeting sgRNAs. A total of 113 hits were tested with 74 true positives. (C) mO-OCAB expression measured by flow cytometry 10 days after FLI1 or control sgRNA transduction. (D) ChIP-seq (FLI1, BRD4) and RNA-seq profiles at the OCAB locus in control and FLI1-depleted cells. Fold change and adjusted p values (Benjamini-Hochberg) are indicated. (E) As in (C) but after SPEN or control sgRNA transduction.

    Journal: Cell reports

    Article Title: Biphasic control of the B cell transcriptome by mTORC1 and GSK3

    doi: 10.1016/j.celrep.2025.116361

    Figure Lengend Snippet: (A) Schematic workflow of the CRISPR screen approach. OCAB reporter cells are created through mOrange-P2A knock-in, transduced with the genome-wide sgRNA library Brunello, and FACS-sorted to identify the activators and repressors of OCAB expression. (B) Distribution of OCAB activators ranked by the RRA score. Selected activators were individually validated with specific targeting sgRNAs. A total of 113 hits were tested with 74 true positives. (C) mO-OCAB expression measured by flow cytometry 10 days after FLI1 or control sgRNA transduction. (D) ChIP-seq (FLI1, BRD4) and RNA-seq profiles at the OCAB locus in control and FLI1-depleted cells. Fold change and adjusted p values (Benjamini-Hochberg) are indicated. (E) As in (C) but after SPEN or control sgRNA transduction.

    Article Snippet: For this, selected sgRNAs and a non-targeting sgRNA from the Brunello library were cloned into lentiGuide-puro (Addgene).

    Techniques: CRISPR, Knock-In, Transduction, Genome Wide, Expressing, Flow Cytometry, Control, ChIP-sequencing, RNA Sequencing